MiMeMo.BarentsSea
This page details at a broad level the code written to extract data and parameterise StrathE2EPolar as part of MiMeMo. You can find information on the depedencies, runtimes, and tasks performed by each of the scripts. Scripts are loosely classified into families - bathymetry - fish - flows - nemo-medusa - saltless - StrathE2E. These can all be run from a master script, with a region file allowing the user to define the model domain for data extraction.
Script Objectives
In the future I plan to detail blow by blow what exactly each script does. This will likely take the form of a dropdown list of vignettes on this website. As there are about 40 scripts at the moment this isn’t going to happen immediately. For now this section is here to briefly mention the purpose of each script.
bathymetry
| 1 DATA WRANGLING |
|
| 2 PLOTTING |
|
| 3 RAYSHADER |
|
| 4 DOMAIN CHOICES |
|
| 5 DEFINE DOMAIN |
|
fish
| 1 FAO REGIONS |
|
| 2 SUMMARIES AND PLOTTING |
|
| 3 DATA WRANGLING |
|
| 4 PLOTTING |
|
flows
| 1 VC-EXTRACTION |
|
| 2 MAKE TRANSECTS |
|
| 3 LABEL TRANSECTS |
|
| 4 SAMPLE PERIMETER |
|
| 5 SAMPLE FLUXES |
|
| 6 VOLUME CHECK |
|
| 7 PLOT EXCHANGES |
|
nemo-medusa
| 1 GRID |
|
| 2 EXTRACTION |
|
| 3 SPATIAL |
|
| 4 TIME SERIES |
|
| 5 PLOTTING |
|
| 6 LIGHT AND TEMP |
|
saltless
| 2 COMPILE DRIVING DATA |
|
| 3 COMPILE PHYSICAL PARAMETERS |
|
StrathE2E
| 2 COMPILE DRIVING DATA |
|
| 3 COMPILE PHYSICAL PARAMETERS |
|
Run Times
